BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F06LP1|AL429775
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1746 0.0
>3x_Contig1401
Length = 8231
Score = 1746 bits (881), Expect = 0.0
Identities = 904/909 (99%), Gaps = 2/909 (0%)
Strand = Plus / Minus
Query: 1 atcgaaaaggaaaagaaacggtagaaaaagccttaaaagccttatgctaaactgctattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7965 atcgaaaaggaaaagaaacggtagaaaaagccttaaaagccttatgctaaactgctattc 7906
Query: 61 acgatagttctcggttaaatagaggctgataccccaagagccttgctgcctatatatcat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7905 acgatagtactcggttaaatagaggctgataccccaagagccttgctgcctatatatcat 7846
Query: 121 tattttgacagc-catttgccatcgctggcaagttgctaaggg-ttcacatgttcaaata 178
|||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 7845 tattttgacagcgcatttgccatcgctggctagttgctaaggggttcacatgttcaaata 7786
Query: 179 ggttaggaaaacgggaaaacgggaaaaccgccagataaaatcatcaaacccgtacatgat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7785 ggttaggaaaacgggaaaacgggaaaaccgccagataaaatcatcaaacccgtacatgat 7726
Query: 239 gacgatgattaaaggccctaaaaaaaactgaaaaatgtatgattcctaattctttaaagg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7725 gacgatgattaaaggccctaaaaaaaactgaaaaatgtatgattcctaattctttaaagg 7666
Query: 299 agctttaaataaagtagggttgtacgagtttagagaatttctatgttagcgaataagtcg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7665 agctttaaataaagtagggttgtacgagtttagagaatttctatgttagcgaataagtcg 7606
Query: 359 gaagggtttcaaaaagaccagatcaactcttagacaattaataaggtctagtattgaaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7605 gaagggtttcaaaaagaccagatcaactcttagacaattaataaggtctagtattgaaag 7546
Query: 419 gtttaactcggtaggaatttactatattttttgtgcttctgctgagactaggcttttact 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7545 gtttaactcggtaggaatttactatattttttgtgcttctgctgagactaggcttttact 7486
Query: 479 tttttattgttgtttccttacctttcgtgactagaaaatatattcaagttctaccctcgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7485 tttttattgttgtttccttacctttcgtgactagaaaatatattcaagttctaccctcgt 7426
Query: 539 gtgtgctatttccaaactatttcaatttgaagagcatcactggataaacgttagtggtca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7425 gtgtgctatttccaaactatttcaatttgaagagcatcactggataaacgttagtggtca 7366
Query: 599 actgtgaataatcttatttgtttctcttacgttggactattttccctgtcactctctggt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7365 actgtgaataatcttatttgtttctcttacgttggactattttccctgtcactctctggt 7306
Query: 659 ttgcttcattgtgaaatctatatttgagtttgaaattttgctttcgttaatttgttattt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 ttgcttcattgtgaaatctatatttgagtttgaaattttgctttcgttaatttgttattt 7246
Query: 719 gaagagtcggtcttgacgtcttcattgatctctgttttgatttagatcagtttatacttg 778
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7245 gaagagtcggtcttgacgtcttcattgatctctgttttgatttagataagtttatacttg 7186
Query: 779 tatcaagaaacgacagaaagttagtacgcggaaggttatctgagaaatagatacttaccg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 tatcaagaaacgacagaaagttagtacgcggaaggttatctgagaaatagatacttaccg 7126
Query: 839 gccttgaggaagaaatcagctccccaataaacccaaaagaaatagacggaatatcataaa 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7125 gccttgaggaagaaatcagctccccaataaacccaaaagaaatagacggaatatcataaa 7066
Query: 899 gcagctatg 907
|||||||||
Sbjct: 7065 gcagctatg 7057
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7901
Number of Sequences: 1807
Number of extensions: 7901
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)